I've got this, but you can turn it off (on each journey) if you want.
I would assume they have taken durability into account otherwise it will be storing up many future problems.
You get used to it, to be honest, although sometimes I've felt it is too keen to turn the engine off despite a heavy electrical load (headlights, fan, heated rear window etc). In those circumstances I have sometimes used the manual override. On the other hand, sometimes it doesn't turn the engine off, and sometimes it decides to turn it back on again after a minute or so stationary.
Of course the kind of driver who never takes the car out of gear or applies the handbrake when stationary will never notice s/he has it in the first place

I would expect that within two or three years most new cars will have it because of pressures to reduce emissions.